PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36576.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YB

Protein Properties

Length: 164aa MW: 18415.7 Da PI: 6.5103

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	158.7	9.4e-50	5	99	3	97
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 eqdr+lPianv+rimk++lP akisk+ k+t+qec++efisfvt+easdkc++e+rktingdd++wal+ lGf++y+e + yl+kyre e++k PON36576.1 5 EQDRLLPIANVGRIMKQILPPTAKISKEGKQTMQECATEFISFVTGEASDKCHKENRKTINGDDICWALSALGFDNYAEVIVRYLHKYRESERDK 99 8*******************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MVDPEQDRLL PIANVGRIMK QILPPTAKIS KEGKQTMQEC ATEFISFVTG EASDKCHKEN 60 RKTINGDDIC WALSALGFDN YAEVIVRYLH KYRESERDKA NQMSKGNNNI GPPHPTTTNT 120 TTRSDQDKVI GDSDHDIHAR STSTTTPTLM EFKIIEKGDH ITLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	1e-54	NF-YB family protein