PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON36762.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 286aa    MW: 31976.2 Da    PI: 5.0411
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON36762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.31.2e-24953145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                kr e++snrqvt+skRrngilKKA+ELS+LCd+++ +++fs+tgk
  PON36762.1  9 KRLESTSNRQVTYSKRRNGILKKAKELSILCDIDIVLLMFSPTGK 53
                689*****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRLKLKIKR LESTSNRQVT YSKRRNGILK KAKELSILCD IDIVLLMFSP TGKPTLYQGE  60
RSNFDEVITK FSQLTPQERT KRKLESLEAL KKTFKKLDHE VNIQDFLGSS SQTVEFQCEM  120
SLPLMVGGVQ EAQPLPWIPN NENQPLMLPN EPNFLPHGEV QCAAEASLSG CSSYFTNGSG  180
KQMEVDDPGQ LSNIEQGGCS LDELSRSAGL SLDFGEQYSY PCLPNDKNLK PNMEMNLQAT  240
PVDYQVNNNC ELPTSLYDNP QHAWVSGFGP CGLALYNENA CQQQLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.15e-62M-type_MADS family protein