PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON37497.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YB
Protein Properties Length: 235aa    MW: 25574.5 Da    PI: 6.6316
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON37497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.85.7e-5723118297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl+kyre+egek
  PON37497.1  23 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNKYREVEGEK 118
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSTKRNPTSS PIGSPLSPDS STKEQDRFLP IANVSRIMKK SLPANAKISK EAKETVQECV  60
SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFENY VGPLKVYLNK YREVEGEKNT  120
MARQEDHSPT NTPISNHGVH DMVNRAAAAA AANSVPNKVD FQDFNGEGFY SLGGQVGGPK  180
SYDEISGMVI GYGDNYMSGG FNVNGMNMIH ESGGDHGNPN RVMAAAQLHH GNIGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.17e-67NF-YB family protein