PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON37514.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 25225.9 Da    PI: 8.0085
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON37514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.41.6e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKA ELS+LCda++a+i+fs tgklyey+s
  PON37514.1  9 KKIDNITARQVTFSKRRRGLFKKALELSTLCDAQIALIVFSATGKLYEYAS 59
                68***********************************************86 PP
2K-box42.33.3e-15911711898
       K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 +   a L+ e+e+   e+Rh++Ge+L++Lsl+e+++Le+ +e++l+++ + K++  l++i  l++k  el e+n++L++k 
  PON37514.1  91 RSRCASLRTELEEKTMELRHMKGEELQELSLEEIKKLENLVETGLSRVAELKDQRSLKEITFLKRKGIELLEDNHRLKQKT 171
                 5567789999999999**************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTRQKIEIKK IDNITARQVT FSKRRRGLFK KALELSTLCD AQIALIVFSA TGKLYEYASS  60
SMQQVIQRHN CQSENHHKLS QPSVDVLECE RSRCASLRTE LEEKTMELRH MKGEELQELS  120
LEEIKKLENL VETGLSRVAE LKDQRSLKEI TFLKRKGIEL LEDNHRLKQK TNVVQVQADL  180
LEKHLIDSIT DIYNTTNSLP HQDHYGSDTT LKLGLPSPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-67MIKC_MADS family protein