PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON37515.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 24555.9 Da    PI: 8.6647
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON37515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.82.5e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKA+ELS+LCdae a+i+fsstgkly+yss
  PON37515.1  9 KKINNITARQVTFSKRRRGLFKKAQELSTLCDAEMALIVFSSTGKLYDYSS 59
                689**********************************************96 PP
2K-box516.3e-18871671898
       K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  + +a L ke+ +  +e+R+++Ge+Le+L l eL++Le+ +e +l ++ ++K++ +l++i++l++k  +l e+n+ L++++
  PON37515.1  87 LERYASLSKELAEKTTEIRQMKGEKLEDLGLDELKRLEKLVEAGLGRVIETKDDRILKEINTLKRKGVQLLEDNHHLKQQM 167
                 4567888888888889**************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MTRQKIEIKK INNITARQVT FSKRRRGLFK KAQELSTLCD AEMALIVFSS TGKLYDYSSS  60
SMQKVIERRY FQSEHPAKSS QPSVDELERY ASLSKELAEK TTEIRQMKGE KLEDLGLDEL  120
KRLEKLVEAG LGRVIETKDD RILKEINTLK RKGVQLLEDN HHLKQQMAGT RRVQTDIIDQ  180
GQSSDSITGI CSSADLPEDF DSSDTTLKLG LPFPGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-66MIKC_MADS family protein