PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37678.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 579aa MW: 64237.6 Da PI: 7.1738

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.5e-11	530	577	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +W+ E+e l ++v+++G+g+Wk+I + + Rt+ ++k++w++ PON37678.1 530 KWSLLEEETLRNGVQKYGKGNWKLILNSYHdifEERTEVDLKDKWRNM 577 8******************************9**********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MDVARWILEF LIRNPDNERL AKRALAVMPI PNNDSRLKKV VLLRTIECEV SDASVPEAIL 60 DNLESVEELD SGQDAAMADS MKAAYCAVAL ECTVKFLVSN GGKPGGKYLN ALKRVWRGRV 120 SRLERSGKSQ LFTTDLKRCW DEVEAAIWDD GVCKKLLSRN TRNEAVRLVL EYLKEAWALM 180 GPSFVEWATT LTAKQGGLAR LGDGGGGSRA MESSGNEPEV GSGGVDGVVE RREPVDAELA 240 SPGRGLSVKG MLELANEVRD QRGSSNDQVC DKAVDVPAGL PNSTDFVISY RPATNVKESH 300 REKVVPRNKQ VAFHKRRSGP VRISDVEDSD TDPSDGRCNA IPTPEVIRIQ EALKSSCLEL 360 RAVVTDPLPE ALRVAAAILS DLATNNVNHE PRLESQRGKE ADVVNPSVEK SIDPVQLTKA 420 VNHEPPLESQ RATEADAANP SVEKSTERVQ PSDANLGNPS CSHQNNVLRP SLMARNSTAH 480 TYEWDDSIDD SPESMVNRNR LHLPSPKRMA ISPLKKYEVK KVSKRRKIKK WSLLEEETLR 540 NGVQKYGKGN WKLILNSYHD IFEERTEVDL KDKWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MDVARWILEF LIRNPDNERL AKRALAVMPI PNNDSRLKKV VLLRTIECEV SDASVPEAIL  60
DNLESVEELD SGQDAAMADS MKAAYCAVAL ECTVKFLVSN GGKPGGKYLN ALKRVWRGRV  120
SRLERSGKSQ LFTTDLKRCW DEVEAAIWDD GVCKKLLSRN TRNEAVRLVL EYLKEAWALM  180
GPSFVEWATT LTAKQGGLAR LGDGGGGSRA MESSGNEPEV GSGGVDGVVE RREPVDAELA  240
SPGRGLSVKG MLELANEVRD QRGSSNDQVC DKAVDVPAGL PNSTDFVISY RPATNVKESH  300
REKVVPRNKQ VAFHKRRSGP VRISDVEDSD TDPSDGRCNA IPTPEVIRIQ EALKSSCLEL  360
RAVVTDPLPE ALRVAAAILS DLATNNVNHE PRLESQRGKE ADVVNPSVEK SIDPVQLTKA  420
VNHEPPLESQ RATEADAANP SVEKSTERVQ PSDANLGNPS CSHQNNVLRP SLMARNSTAH  480
TYEWDDSIDD SPESMVNRNR LHLPSPKRMA ISPLKKYEVK KVSKRRKIKK WSLLEEETLR  540
NGVQKYGKGN WKLILNSYHD IFEERTEVDL KDKWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	2e-17	MYB_related family protein