PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37688.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 810aa MW: 89797.8 Da PI: 7.2497

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.2	1.5e-18	237	336	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++lv++ PON37688.1 237 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCMQSMQLQAGDTVTFSRID-PGGKLVMG 333 99************************555556677***********99899999999.*******************887.77777777 PP EE- CS B3 96 vfr 98 ++ PON37688.1 334 YRK 336 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MHSHSYSMKI QTDGTPKGFG GSSDVGDSQS TIVQARVVGD SVDEGRLMQL CKIMEANEPN 60 ILPCFHRAEI NAFSQTKQDE NVHQMGDIGR EFSSVTQSIG SLTYSKPDNN RTALEVKDRH 120 ESHLQPSLNM ILGTPSRTSS FVLPFSGTAV DGREQSKTPS PSFEQHRARP ILPKPFKSGL 180 NVSSETNKGV LNQMRIARPP GEGRGKSQLL PRYWPRITDQ ELEQLSGDLN SSIVPLFEKV 240 LSASDAGRIG RLVLPKACAE AYFPPISQSE GLPLRIQDVK GNEWTFQFRF WPNNNSRMYV 300 LEGVTPCMQS MQLQAGDTVT FSRIDPGGKL VMGYRKASNN EDVQEVQAQT SILPNGTLGE 360 TSFSGGTENL PTGNGYSGHL QTNKGSKDSR VDSMSEHLHL ADGDIGVHKS ETNGCRTNED 420 SLQPPVLKLE KKRTRNIGSK SKRLLMHSED VLELRLTWEE AQDLLRPPPS VKPSIVTIED 480 QDFEEYDEPP VFGKRTIFIS RPSGGQEQWA QCDDCSKWRK LPVEVLLPPK WTCSDNAWDS 540 SRCSCSAPEE VSLKELENLL RSSKDLKKRR TTENRKTASE HEPSGLDALA RAAVLGDNVG 600 DTGEPSVGAT TKHPRHRPGC TCIVCIQPPS GKGKHKPTCT CNVCMTVKRR FKTLMLRKKK 660 RQSEREAESA QKDDNEHKEE RETNGTSTGA LSHANQSENK VIQSRVQADV VETSGGQIDL 720 NCHPGREDMQ LEVPGLTMMG LVPTSSCRLE NYIKRIPSMN MYEQQPTLGS CLLKKATGEG 780 GRDLSDEGYH TSVWERANRV DGVYREPKLD

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MHSHSYSMKI QTDGTPKGFG GSSDVGDSQS TIVQARVVGD SVDEGRLMQL CKIMEANEPN  60
ILPCFHRAEI NAFSQTKQDE NVHQMGDIGR EFSSVTQSIG SLTYSKPDNN RTALEVKDRH  120
ESHLQPSLNM ILGTPSRTSS FVLPFSGTAV DGREQSKTPS PSFEQHRARP ILPKPFKSGL  180
NVSSETNKGV LNQMRIARPP GEGRGKSQLL PRYWPRITDQ ELEQLSGDLN SSIVPLFEKV  240
LSASDAGRIG RLVLPKACAE AYFPPISQSE GLPLRIQDVK GNEWTFQFRF WPNNNSRMYV  300
LEGVTPCMQS MQLQAGDTVT FSRIDPGGKL VMGYRKASNN EDVQEVQAQT SILPNGTLGE  360
TSFSGGTENL PTGNGYSGHL QTNKGSKDSR VDSMSEHLHL ADGDIGVHKS ETNGCRTNED  420
SLQPPVLKLE KKRTRNIGSK SKRLLMHSED VLELRLTWEE AQDLLRPPPS VKPSIVTIED  480
QDFEEYDEPP VFGKRTIFIS RPSGGQEQWA QCDDCSKWRK LPVEVLLPPK WTCSDNAWDS  540
SRCSCSAPEE VSLKELENLL RSSKDLKKRR TTENRKTASE HEPSGLDALA RAAVLGDNVG  600
DTGEPSVGAT TKHPRHRPGC TCIVCIQPPS GKGKHKPTCT CNVCMTVKRR FKTLMLRKKK  660
RQSEREAESA QKDDNEHKEE RETNGTSTGA LSHANQSENK VIQSRVQADV VETSGGQIDL  720
NCHPGREDMQ LEVPGLTMMG LVPTSSCRLE NYIKRIPSMN MYEQQPTLGS CLLKKATGEG  780
GRDLSDEGYH TSVWERANRV DGVYREPKLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	648	659	KRRFKTLMLRKK
2	648	661	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein