PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON37911.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family TCP
Protein Properties Length: 432aa    MW: 47320.1 Da    PI: 9.7383
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON37911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1419.2e-441383012137
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssa..sec.eaesssssasn 84 
                 + kkdrhski+T++g+RdRRvRls+e+a++fFdL d+LGfdk+skt+eWLl+++k+aikel +t             s   +  sec ea++ ++    
  PON37911.1 138 PCKKDRHSKIYTAQGLRDRRVRLSIEIAREFFDLHDMLGFDKASKTLEWLLTKSKKAIKELSRTklscssrstkislS---SttSECeEAAATKV---- 229
                 679*************************************************************55554444333321...02234433333333.... PP

         TCP  85 sssg......................kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137
                    +                      ++   a ++++ +k  ++    akesrakararar rt+ek    n++n
  PON37911.1 230 ---NeavdrinvendrnlggggggggAEGVLAISKSDLEKFMSEGVVAAKESRAKARARARARTKEKRYCYNNNN 301
                 ...034445557888889999*9997444445566666666666788999****************987776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MFSSTNSPFP QYYFPSTSSS SSYPPPPPLP PPPPPPPLLV NQDPNSSCVD NNIFLHQNLN  60
HSHFEQIPLP TPFSLTNNNN NNIIPQIIIP ETLINLGFSN STTPPPLMMT NKAHEDHISS  120
GSSLNLHGLG PNFVPKKPCK KDRHSKIYTA QGLRDRRVRL SIEIAREFFD LHDMLGFDKA  180
SKTLEWLLTK SKKAIKELSR TKLSCSSRST KISLSSTTSE CEEAAATKVN EAVDRINVEN  240
DRNLGGGGGG GGAEGVLAIS KSDLEKFMSE GVVAAKESRA KARARARART KEKRYCYNNN  300
NSTTKRSSTT TSASITSSTT VTCLSSAQIL NQFRSPNFIS ETGPSSLGLD DNHNQSVVIK  360
RSRLKLFPGS ISSATTHHEY HQHQHQEHFC GISKGESSNH IIYSPTTLLP QNWDTNGAAT  420
VSGRPGFRLP IT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279288RAKARARARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.24e-29TCP family protein