PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38009.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 299aa    MW: 31686.7 Da    PI: 6.1721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.7e-10149193554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  PON38009.1 149 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 193
                 99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MANNPSEAPT DDFLEQILGF PTFASADGNL SVTDGGLAGP HGGPMMLQLS SGDGSGHIPA  60
VGSGGGGGFH GSVFPLGLSL EQGKAGFLKP EEASGSGKRF RDDVVDGRAS TVKNVFHGQP  120
IPATVAIAPH PPAMRPRVRA RRGQATDPHS IAERLRRERI AERIRALQEL VPSVNKTDRA  180
AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA VAPLVTDIPL SSVEEEGSEG DRNQPAWEKW  240
SNDGTERQVA KLMEENVGSA MQFLQSKALC IMPISLASAI YHSQPPDTSN VKPEANPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-105bHLH family protein