PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38050.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 132aa    MW: 15171.7 Da    PI: 9.3879
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.3e-152067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd l  +++ ++G g W++++++ g++R++k+c++rw+++l
       PON38050.1 20 KGAWTREEDILVEECIDMYGEGKWHLVPAREGLNRCRKSCRLRWLNHL 67
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MQTVVVDITE AGSSTRGVRK GAWTREEDIL VEECIDMYGE GKWHLVPARE GLNRCRKSCR  60
LRWLNHLKPD IKRGKFTADE VDLILRLHRL LGNRQMNYIW VGHLPCCSVA ALHHFRGTVA  120
PMVHPRPVLS YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.15e-43MYB family protein