PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38078.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARR-B

Protein Properties

Length: 685aa MW: 75351.6 Da PI: 6.0895

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89	4.4e-28	206	259	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl PON38078.1 206 KPRVVWSVELHRKFVGAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 259 79*****************.******************************8 PP
2	Myb_DNA-binding	35.7	1.9e-11	208	258	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +++t++++ s++qky+ PON38078.1 208 RVVWSVELHRKFVGAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 258 678******************************99***********7 PP
3	Response_reg	79.5	1.1e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ + ll+++l++ +y +v++++++ +al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + Ga PON38078.1 20 VLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAVSALNMLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDHKLVMKGITHGAC 114 799******************.***********888888***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON38078.1 115 DYLLKPVRIEELKN 128 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MTVEQRVDDP RDQFPVGMRV LAVDDDPTCL LLLETLLRRC QYHVTTTSQA VSALNMLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DHKLVMKGIT HGACDYLLKP 120 VRIEELKNIW QHVIRRKKND SKNPKNSENR DKSYGVIGEG EPGSAGTGNS DQNGKVNKKR 180 KDQNDDDEDE HDENGNDIDD PSTQKKPRVV WSVELHRKFV GAVNQLGIDK AVPKKILDLM 240 NVEKLTRENV ASHLQKYRLY LKRISCVANQ QANMVAALGS SDSSYLRMGS MNGLGNFNAL 300 TGPMQFQNPA FRSFPPGGMI GRLNSSAGLG LRCLPSSGMI QLGHAQNSSS CNDQMKFHQA 360 TLPGNHDGSL LQGMPMPFEL DRQHSKVVQH IGDPSTGLDD TTVFPLSTGL TEAKITTNSS 420 SSNGLGVTNN MLMLGHSHNP QGGREFGNQS SVSLASLKSE FGSSLQDSGR CTDNWSSDAQ 480 PSGFQSNSFP LSDRYKQSTM HPGIPRDNNM PVMASQIGGN QFDVSSMSSV SVRTHDSITD 540 MQCQASAIDN DALIQGWVNH KQDPSYRPNI MPSSINSLMP VNGGAMGPLD QSLELKNQIF 600 HRSMDFNSMG ESDYVDPLMA KYDEVEKSTR ETLKLKQEYL MGQQPHGGYI PSNYGSLGDV 660 VSAMMKQEQD RAEGDFDAFS LGTSI

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MTVEQRVDDP RDQFPVGMRV LAVDDDPTCL LLLETLLRRC QYHVTTTSQA VSALNMLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DHKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKND SKNPKNSENR DKSYGVIGEG EPGSAGTGNS DQNGKVNKKR  180
KDQNDDDEDE HDENGNDIDD PSTQKKPRVV WSVELHRKFV GAVNQLGIDK AVPKKILDLM  240
NVEKLTRENV ASHLQKYRLY LKRISCVANQ QANMVAALGS SDSSYLRMGS MNGLGNFNAL  300
TGPMQFQNPA FRSFPPGGMI GRLNSSAGLG LRCLPSSGMI QLGHAQNSSS CNDQMKFHQA  360
TLPGNHDGSL LQGMPMPFEL DRQHSKVVQH IGDPSTGLDD TTVFPLSTGL TEAKITTNSS  420
SSNGLGVTNN MLMLGHSHNP QGGREFGNQS SVSLASLKSE FGSSLQDSGR CTDNWSSDAQ  480
PSGFQSNSFP LSDRYKQSTM HPGIPRDNNM PVMASQIGGN QFDVSSMSSV SVRTHDSITD  540
MQCQASAIDN DALIQGWVNH KQDPSYRPNI MPSSINSLMP VNGGAMGPLD QSLELKNQIF  600
HRSMDFNSMG ESDYVDPLMA KYDEVEKSTR ETLKLKQEYL MGQQPHGGYI PSNYGSLGDV  660
VSAMMKQEQD RAEGDFDAFS LGTSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-131	ARR-B family protein