PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38574.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 587aa MW: 64690.9 Da PI: 8.2388

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l PON38574.1 59 KGGWTPQEDETLRSAVAAFKGKNWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	59.2	9.4e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ ++v ++G W++Ia+ ++ gR +kqc++rw+++l PON38574.1 111 KGPWTQEEDKKITELVSKYGATKWSLIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	53.8	4.6e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT +E++ l +a++++G++ W+ Ia+ ++ gRt++ +k++w++ PON38574.1 163 KDAWTLDEELALMNAHRRHGNK-WAEIAKVLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MAEVKLEERC LENKQSMAAS SSSVSEGSGS VFLKSPGVCS PASTSPTHRR TSGPIRRAKG 60 GWTPQEDETL RSAVAAFKGK NWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDK 120 KITELVSKYG ATKWSLIAKS LPGRIGKQCR ERWHNHLNPE IRKDAWTLDE ELALMNAHRR 180 HGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFFMNTGN LPPVTKSNPQ NGLKDTNKCA 240 ATKKSLGCLN KELDSTVHTL GNTVVPKTDE DGKHQQDSPG IPCSMGGSSS APLNESADSE 300 GVESKPRSNM DPNNYSNSES VLKFENCGIN REPNIEDCLM NKESQNCDIN SDIKFGDYGF 360 NSEAKEKVFG TPLPSEALIC GSLYYVPPQL DECIPVDSDL SSMHCLQHEF NSSTFSSPVS 420 CFTPPCVKGQ GLSLTSPESV LKMAAMTFPN TPSILRKRKN KPQTPLLPNK IEKVDRELNG 480 DMLHASQDRD GTNNSLEMPG SQDRSLCRSP SCHGINSIGP SGKGFNASPP YRLRSKQTAV 540 FNKSVEKQLE FTFDKECQGN IKSLEFSAKA SSPVTEDCLH ATKTGVT

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MAEVKLEERC LENKQSMAAS SSSVSEGSGS VFLKSPGVCS PASTSPTHRR TSGPIRRAKG  60
GWTPQEDETL RSAVAAFKGK NWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDK  120
KITELVSKYG ATKWSLIAKS LPGRIGKQCR ERWHNHLNPE IRKDAWTLDE ELALMNAHRR  180
HGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFFMNTGN LPPVTKSNPQ NGLKDTNKCA  240
ATKKSLGCLN KELDSTVHTL GNTVVPKTDE DGKHQQDSPG IPCSMGGSSS APLNESADSE  300
GVESKPRSNM DPNNYSNSES VLKFENCGIN REPNIEDCLM NKESQNCDIN SDIKFGDYGF  360
NSEAKEKVFG TPLPSEALIC GSLYYVPPQL DECIPVDSDL SSMHCLQHEF NSSTFSSPVS  420
CFTPPCVKGQ GLSLTSPESV LKMAAMTFPN TPSILRKRKN KPQTPLLPNK IEKVDRELNG  480
DMLHASQDRD GTNNSLEMPG SQDRSLCRSP SCHGINSIGP SGKGFNASPP YRLRSKQTAV  540
FNKSVEKQLE FTFDKECQGN IKSLEFSAKA SSPVTEDCLH ATKTGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-151	MYB family protein