PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38578.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 361aa MW: 41329.1 Da PI: 9.9361

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.4e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl PON38578.1 4 RQRWGSEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + PON38578.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MKERQRWGSE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENIKTVDP 120 LEEGKYDRIL ETFAEKLVKD RPAPGYHLMA TSNGGFIHTD HPNSSTAPTL LPPWLSNSNG 180 TSGVRPPSPS VTLSLASSTV AATSPPIPWL QDTAATLVMG NLPSTHASIP AACGENLIMS 240 ELAECCRELD EGHRAWAAHK KEAAWRLRRV ELQLESEKAC RRREKMEEIE AKVKALREEQ 300 KLALERIEAE YREQLVGLRR DAEAKEQKLA EQWTAKHMRL SKFLEQMGCR SSRHADQPNS 360 R

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MKERQRWGSE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENIKTVDP  120
LEEGKYDRIL ETFAEKLVKD RPAPGYHLMA TSNGGFIHTD HPNSSTAPTL LPPWLSNSNG  180
TSGVRPPSPS VTLSLASSTV AATSPPIPWL QDTAATLVMG NLPSTHASIP AACGENLIMS  240
ELAECCRELD EGHRAWAAHK KEAAWRLRRV ELQLESEKAC RRREKMEEIE AKVKALREEQ  300
KLALERIEAE YREQLVGLRR DAEAKEQKLA EQWTAKHMRL SKFLEQMGCR SSRHADQPNS  360
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-162	MYB family protein