PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38591.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 311aa MW: 34364.9 Da PI: 4.6242

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.1	1.5e-32	123	179	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYY+Ct ++C++kk+vers++dp++++itYeg H h PON38591.1 123 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPRCNAKKQVERSSDDPDTLIITYEGLHLH 179 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MDEDTIIGSS GAWSSSDGSE EELVRELLDD VSPFFLIQED STELIQTSSP QNEQLSHCGR 60 FNPATVYSGP TIEDIENALS VTSRNIQPQQ LSPARMSILE TGLSKIENKY TLKIKSSDNG 120 MTDDGYKWRK YGQKSIKNSP NPRSYYKCTN PRCNAKKQVE RSSDDPDTLI ITYEGLHLHF 180 TYPFFILGQN KDLSPATKKP KKSASYLAAQ EDEPQQTQET EESPHVLDPT GLETISASMG 240 YVQEPGQEER ASQGLLQDVV PLMILNPSTN NTSSHSSCSA NHSPPTSPSS LSWPPNYYTS 300 CLGIGINSSI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	4e-52	WRKY family protein