PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38640.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 264aa    MW: 29688.5 Da    PI: 6.9181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.2e-1379131155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN+ ++ Lr llP +  ++ kKls  +++ ++ +YI +Lq
  PON38640.1  79 KKLNHNASERVRRKKINHLYSSLRILLPAS--GHTKKLSIPATVSRVLKYIPELQ 131
                 6789*************************9..46666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MLALSPPLFS SNLGWPLEDP IGHEEQNYFF TDIETTSDHQ SLYLNFPTPT TSDQRPPSEF  60
DRSATPSNTI INSDLSMVKK LNHNASERVR RKKINHLYSS LRILLPASGH TKKLSIPATV  120
SRVLKYIPEL QQQVEGLVRK REELLSKLNS TKQGINNQIH HQEINQIKST AQTPLSSVSA  180
SQLNDNEVVI QVSTYKVHKN QLSVMLHNLE EDGLSLLNAS SFESFGGRVF HNLHLQVEGS  240
YSMECGTLGD KLMSLCASKE ELFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-54bHLH family protein