PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38642.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 241aa    MW: 27263.9 Da    PI: 8.8778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.62.7e-1469121155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR+++N  ++ Lr+llP a   + kKls  ++  ++ +YI++Lq
  PON38642.1  69 KKLSHNASERDRRKKMNCLYSSLRSLLPAA--DQMKKLSNPATISRTLKYIRELQ 121
                 6789*************************6..49999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLALYAPSPS AINGMAFDQE YRTNDLAGSS SPFHHLDLPY LQQQLQGEVA ELDQSPPSTA  60
VTGDPTIIKK LSHNASERDR RKKMNCLYSS LRSLLPAADQ MKKLSNPATI SRTLKYIREL  120
QNQVQGLIQK KEVLLSSISR KVDLIYQERH KQSSAWRSLS NVSANRLNDT EIVLQISTFK  180
VQQTPLSHIL VDLEEDGFSL LNATSFESFG GRVFYSLHLQ VERITYMKST NNLNENFLSP  240
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-53bHLH family protein