PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38682.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family FAR1
Protein Properties Length: 150aa    MW: 17531 Da    PI: 9.2978
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.91.2e-1670148181
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                 +fYn+Y ++vGF +r+sk +k  +ng++++rtf+Cs eg++ +++++  + + + aetr +C a +k++ ++ + + v+++
  PON38682.1  70 DFYNAYVYKVGFGIRRSKGQKG-KNGRMISRTFRCSYEGYHGKDRRD-INVKCHGAETRFSCLAIMKINSRQASIYSVIEF 148
                 6****************99998.7888****************9999.89999*************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MDCGNDLEEY QSRRKLEFGP EEILVLENEA KEEKGNIYTK SRTKKIHSNI FDKIIPKVSM  60
EFKIEEEAYD FYNAYVYKVG FGIRRSKGQK GKNGRMISRT FRCSYEGYHG KDRRDINVKC  120
HGAETRFSCL AIMKINSRQA SIYSVIEFIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-13FAR1 family protein