PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38920.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 213aa MW: 24501.6 Da PI: 10.1202

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63	6e-20	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++++G ++WktIa+ g++R++k+c++rw++yl PON38920.1 28 KGAWTEEEDRKLAEVIALHGAKRWKTIAAIAGLNRCGKSCRLRWLNYL 75 79********************************************97 PP
2	Myb_DNA-binding	50.6	4.3e-16	81	126	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l PON38920.1 81 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 126 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MGPLRDQSSL KPTEGKNNTA STKKEVNKGA WTEEEDRKLA EVIALHGAKR WKTIAAIAGL 60 NRCGKSCRLR WLNYLRPNIK RGNISDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN 120 YWNSHLSKKI KLKEKQIKGT TSSSRKQGSK INYQIKVHEG DQEENNSLIF NNNKINNYES 180 SNTTTIHFDV DDFFDFSNEG SLNLEWISKF IQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-51	MYB family protein