PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39010.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 183aa    MW: 21072.7 Da    PI: 6.7979
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox535.8e-172275356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                k+ +++++q++ Le+ F  ++++  e++ +LA+ lg++ rqV vW+qN+Ra+++
  PON39010.1 22 KKKRLNEDQVRLLERSFTFDKKLEPERKLQLADLLGIPPRQVAVWYQNKRARWR 75
                566799***********************************************9 PP
2HD-ZIP_I/II105.63.7e-3421112192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  +kk+rl+++qv+lLE+sF+ ++kLeperK +la  Lg+ prqvavW+qn+RAR++++ lE d++aL+ ++++  +e+++Le + e Lr el+
   PON39010.1  21 NKKKRLNEDQVRLLERSFTFDKKLEPERKLQLADLLGIPPRQVAVWYQNKRARWRAQTLELDCSALQLKLETALAEKRQLEGDIEMLRGELE 112
                  59**************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDLFQTQTQS HKNSYYNSKH NKKKRLNEDQ VRLLERSFTF DKKLEPERKL QLADLLGIPP  60
RQVAVWYQNK RARWRAQTLE LDCSALQLKL ETALAEKRQL EGDIEMLRGE LEMARQSLFA  120
VGVSVVDHQK AHPPPTTVCS VSEGGSSSGS FGYQYVIDHD HGHGHEDQVL QMDHELFASL  180
IDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.13e-30HD-ZIP family protein