PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39054.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 259aa    MW: 27833.7 Da    PI: 5.5434
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002106128123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PON39054.1 106 FSCNYCQRKFYSSQALGGHQNAH 128
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKPTIDLEVE ASANDSDVSS QVASNISIQE TSAGSSNESL TNSSHLTNTA MVQSGLDPVA  60
LDLTLSFNNN DDLGARESVG LSLSSTSESS NEPSSLNTAA AITRVFSCNY CQRKFYSSQA  120
LGGHQNAHKR ERTLAKRAMR MSIFSEKYTG LASLPLHGSS FRSLGIKAHS SHHGMTPPVR  180
PPEMRSSARF EQGYFGVPIF LQDDEAELLW PGSFRPVSET SNTSAHPSFV LTGSSNLNFA  240
EVTPTADIDN STPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-54C2H2 family protein