PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39503.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 290aa    MW: 31703.5 Da    PI: 8.0509
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-13555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+e l  +v+++G+g Wk I r         +R+  ++k++w++
       PON39503.1  5 KQKWTSEEEEALRAGVAKHGTGKWKDIQRDPEfnpylVNRSNIDLKDKWRN 55
                     79************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGNPKQKWTS EEEEALRAGV AKHGTGKWKD IQRDPEFNPY LVNRSNIDLK DKWRNMSCSA  60
NGQGPREKSR TVKAKTNSDA PATQVSTAQT AVAAPVLRDA AVVPNSDDST KAVPDGKNSS  120
QLVVLTPDKY NTVIFEALST LKEPNGSDTS AILSFIEQRH EVPPNFRRVL STRLRRLVAQ  180
DKIEKIQNCY KMKSDADASF GTKTPAPKQG SQPRPSQTAV HRTTSTDVVD EAAVAAAYKI  240
AEAENRSFVA AEAVKEAERI SEMAEDSESI LQLAKEIFEK CSQGETVLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.15e-58MYB_related family protein