PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39597.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 226aa    MW: 25534.5 Da    PI: 10.6747
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.3e-14128214195
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 f+  ++ps+v+   +l l  +f++++  +k ++  +tl de+g++++  +  rk +    l++GWk+F+ a++L +gD ++F+l++ s f+  v 
  PON39597.1 128 FIRSMLPSHVTGGFWLGLNVHFCKTNL-PK-RDEVMTLIDEDGNEYKTIYLARKPG----LSGGWKGFAVAHELVDGDALIFQLIRPSAFK--VF 214
                 778899*****************9884.33.5568***************444444....9************************988884..43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAKPKVSYEE SRRKRLEENK QRMEALNLPK LAQALQNSSP SKTSPIKNVK KPRTIEKQVV  60
AVRRSSRVAN KPAPVYKEIV IERLVIPRGI SKHRDLSNRV YASDEARTNA IERAEKLLSG  120
LESDYPAFIR SMLPSHVTGG FWLGLNVHFC KTNLPKRDEV MTLIDEDGNE YKTIYLARKP  180
GLSGGWKGFA VAHELVDGDA LIFQLIRPSA FKVFILRVNS PKQGNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-77B3 family protein