PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON39666.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 509aa MW: 55139.4 Da PI: 4.4865

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON39666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.1e-36	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i+ PON39666.1 42 FLSKTYDMVDDPATDPIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKSIN 129 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PON39666.1 130 RRKP 133 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDGVTNGGEA PSSGGGGAGG GAAQPAAPAP APMPNANAPP PFLSKTYDMV DDPATDPIVS 60 WSPTNNSFVV WNPPEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVDPDRW EFANEGFLRG 120 QKHLLKSINR RKPVHGQNQQ QPQPSHAQSS VGACVEVGKF GLEEEVERLK RDKNVLMQEL 180 VRLRQQQQST DNQLQTMVQR LQGMEQRQQQ MMSFLAKAVQ SPGFFAQFVQ QQNESNRRIT 240 EANKKRRLRQ EGIDESDLSA ASDGQIVKYQ PPMNEAAKAM LRQIMKADAS SGMDSFKNSP 300 DGFLIGDGSS SSTAIDSRSS SSRVSKVTLQ EVLPTSGQTS SVPVSSGIPA AAISEIQSSP 360 QPLISENVTT TPFPDISVLV GAQDAPSLPI SQGDVVMPEL SQIPEMVPGD NILGTETSDG 420 FLDPTSFGVN GSMSIDLDDI APDPEIDALL ESTTFWDDLL AQSPMAEESS PDGTSSGIEA 480 QPKENGWDKK HMDKLTEQME LLTSDAKGV

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDGVTNGGEA PSSGGGGAGG GAAQPAAPAP APMPNANAPP PFLSKTYDMV DDPATDPIVS  60
WSPTNNSFVV WNPPEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVDPDRW EFANEGFLRG  120
QKHLLKSINR RKPVHGQNQQ QPQPSHAQSS VGACVEVGKF GLEEEVERLK RDKNVLMQEL  180
VRLRQQQQST DNQLQTMVQR LQGMEQRQQQ MMSFLAKAVQ SPGFFAQFVQ QQNESNRRIT  240
EANKKRRLRQ EGIDESDLSA ASDGQIVKYQ PPMNEAAKAM LRQIMKADAS SGMDSFKNSP  300
DGFLIGDGSS SSTAIDSRSS SSRVSKVTLQ EVLPTSGQTS SVPVSSGIPA AAISEIQSSP  360
QPLISENVTT TPFPDISVLV GAQDAPSLPI SQGDVVMPEL SQIPEMVPGD NILGTETSDG  420
FLDPTSFGVN GSMSIDLDDI APDPEIDALL ESTTFWDDLL AQSPMAEESS PDGTSSGIEA  480
QPKENGWDKK HMDKLTEQME LLTSDAKGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-125	HSF family protein