PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON39709.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 262aa MW: 29434.6 Da PI: 5.9756

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON39709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.5	3.5e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++l + + G +W+ ++++ g++R++k+c++rw +yl PON39709.1 14 RGAWTLEEDQKLTNFILNNGIQCWRHVPKRAGLKRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.2	6.9e-17	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++++++++ +lG++ W++Ia +++ gRt++++k++w+ PON39709.1 67 RGAISEEEEDQIIQLHSRLGNR-WSKIALHFP-GRTDNEIKNHWN 109 7889****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGRQPCCEKI GLKRGAWTLE EDQKLTNFIL NNGIQCWRHV PKRAGLKRCG KSCRLRWINY 60 LRPDVKRGAI SEEEEDQIIQ LHSRLGNRWS KIALHFPGRT DNEIKNHWNC KIKKKLRLNG 120 LAHGPKNNHD EGTDLNSTNS SEQQASKCSP KEVQNSTTTP NSGSKQSYIL QNENGNDMSC 180 GSSLNDNIIR SGSDAASIIL QADDSSGNSS GSTTFSAGMV LEEEYRCNFS EEDFGNWMES 240 VEAFLSWDEC NNLEDVFNVG DD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	KIKKKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	2e-69	MYB family protein