PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39797.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HSF
Protein Properties Length: 298aa    MW: 32948.5 Da    PI: 4.9345
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.53.9e-37101012102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+ ++++isw+eng++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF++++F++g+kell++i+
    PON39797.1  10 FLTKTYQLVDDPVTNDVISWNENGTAFVVWKTADFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDK---------WEFANENFRRGQKELLSEIR 97 
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
    PON39797.1  98 RRKT 101
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAQRSVPAPF LTKTYQLVDD PVTNDVISWN ENGTAFVVWK TADFARDLLP KYFKHNNFSS  60
FVRQLNTYGF RKVVPDKWEF ANENFRRGQK ELLSEIRRRK TVTTTTATTS PAQVSTGGKS  120
GGEGSSTPSN SGEDLGSTST SSPDSKSPGS VETAALTQFA DLSGENEKLK KDNEVLTSEL  180
AQTKRQCDEL IAFLTEYMKV GPDQINRIMR QGSCRSINGG LVGDEGDDRD DDDDENEVQE  240
EKEEEEGLKL FGVWVKGNEN KKKRTVNDGT GLTGPDPKKM KGVDFHAPPL MKSSNVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-83HSF family protein