PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39946.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 129aa    MW: 15068.1 Da    PI: 5.7122
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.11.5e-15450349
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                i+++  r +tfskR+ gi KKA+EL +LC+ ev  + fs++gk + y
  PON39946.1  4 IQDENDRLITFSKRKSGIYKKANELFTLCEGEVGFVTFSPSGKPFSY 50
                889999************************************96665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MRIIQDENDR LITFSKRKSG IYKKANELFT LCEGEVGFVT FSPSGKPFSY GNPSIDSVGE  60
RLLLDQTTEV TMTDVTTHPI MEVHREMRIN NLNQKYNNLY SHMEVEKERQ QSLQKMPLEA  120
PDELWKRID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.18e-28M-type_MADS family protein