PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON40083.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 203aa MW: 22460.6 Da PI: 9.3262

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON40083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.7	5.9e-42	87	163	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C adlseak+yhrrhkvCe+hska++v+v+gl+qrfCqqCsrfhe+sefDe+krsCrrrLa+hnerrrk++a PON40083.1 87 CQAERCGADLSEAKRYHRRHKVCEFHSKASAVVVAGLRQRFCQQCSRFHEVSEFDEAKRSCRRRLAGHNERRRKSSA 163 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MEANKMNYDQ LRHSWKEKGN IGDQDQLVMD NNIDTDEEEG GGGGGGDSSS LDKERRNKKA 60 VVAPPGRLRG SGSGSGGGGG AVSPPSCQAE RCGADLSEAK RYHRRHKVCE FHSKASAVVV 120 AGLRQRFCQQ CSRFHEVSEF DEAKRSCRRR LAGHNERRRK SSAESYADGK TSKESHQYNR 180 PESDDQRGKF LGNSTCKQFH VRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	4e-42	SBP family protein