PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40201.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 94aa    MW: 10718.1 Da    PI: 9.3627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.84e-0821611454
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                d+i +  ++L++l+P+ + + +s K+s + +L+++++YI++L
  PON40201.1 21 DQITDLVSKLQRLIPEiR-NRRSDKVSASKVLQETCNYIRNL 61
                6899999*********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MSSRRSRSRQ SGVSMNNITD DQITDLVSKL QRLIPEIRNR RSDKVSASKV LQETCNYIRN  60
LHREVDDLSD RLSELLATTD NDSAQAAIIR SLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.16e-43bHLH family protein