PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON40205.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 303aa MW: 34478.2 Da PI: 6.7233

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON40205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7e-18	84	137	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PON40205.1 84 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 137 456899***********************************************9 PP
2	HD-ZIP_I/II	129.1	1.8e-41	83	173	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++n++L++++++L++e+ PON40205.1 83 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALQAQNQKLQAEI 173 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MTGNGMAFFP TNFMLQTPNE EDHHHHPPTS LNPINLPPCT PQDFHGVASF LGKRSVSFSG 60 IELGEDGNGG EDDLSDDGSQ AGEKKRRLNM EQVKTLEKNF ELGNKLEPER KMQLARALGL 120 QPRQIAIWFQ NRRARWKTKQ LEKDYDLLKR QFEAIKADND ALQAQNQKLQ AEILAMKNRE 180 PTESINLNKE TDQGSCSNRS DNSSDIKLDI SRTPAAIDST LSSHPRPLFP SSLRPNSGHH 240 VAQLFQSSSS ARSSDQQLQY QKNDHHHHQQ HHHVVKEESL SNMFCAIDDQ SGFWPWLEQQ 300 HFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	140	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-112	HD-ZIP family protein