PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON40545.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARR-B

Protein Properties

Length: 379aa MW: 42926.7 Da PI: 4.9397

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON40545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.1	6e-16	124	181	1	55
G2-like 1 kprlrWtpeLHerFveaveq.LGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 kpr +Wt+e H F++av++ + s++ +Pk+i e m+ g +t+e+v+SHLQk+Rl PON40545.1 124 KPRFVWTTEVHGIFLKAVAEvMAESDRPVPKKIQEKMQNMGvnVTRENVASHLQKFRL 181 79**************87257789********9984469**********8 PP
2	Response_reg	25.3	7.7e-10	1	51	14	63
HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHH CS Response_reg 14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellk 63 ++++l + gy +v++++ +eeal ll++ +D+++ + +p+mdG++ll+ PON40545.1 1 MENMLHSFGY-NVTTCQRAEEALSLLCKDGrrYDILISEVHLPEMDGFNLLE 51 5789999*.***********887778***************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MENMLHSFGY NVTTCQRAEE ALSLLCKDGR RYDILISEVH LPEMDGFNLL EITKDVKFMF 60 KHVIRKKREI ELKEIEPLKI MEQVNIVSNN TTANEGDGKI LKRAIRNHEV EGELLHDLTT 120 KEKKPRFVWT TEVHGIFLKA VAEVMAESDR PVPKKIQEKM QNMGVNVTRE NVASHLQKFR 180 LNRNKKTNLI QSTPELIKPY PVEGECKHVN ALPSDPSHHN LITTLGVDSP TLLGNLVSNV 240 VNINETFHEG HVEANNESPN LSDPPFEARI QMIDDTTMNQ PFDSMLSPPV SYEIQVQALE 300 DNVAVITSME PNDYPTIEYL LPGQDCAIEG NGTAPMEIDD PISLFNTNNI YVNNFSIEYT 360 GLNVGYENPA EKNAHVLRQ

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MENMLHSFGY NVTTCQRAEE ALSLLCKDGR RYDILISEVH LPEMDGFNLL EITKDVKFMF  60
KHVIRKKREI ELKEIEPLKI MEQVNIVSNN TTANEGDGKI LKRAIRNHEV EGELLHDLTT  120
KEKKPRFVWT TEVHGIFLKA VAEVMAESDR PVPKKIQEKM QNMGVNVTRE NVASHLQKFR  180
LNRNKKTNLI QSTPELIKPY PVEGECKHVN ALPSDPSHHN LITTLGVDSP TLLGNLVSNV  240
VNINETFHEG HVEANNESPN LSDPPFEARI QMIDDTTMNQ PFDSMLSPPV SYEIQVQALE  300
DNVAVITSME PNDYPTIEYL LPGQDCAIEG NGTAPMEIDD PISLFNTNNI YVNNFSIEYT  360
GLNVGYENPA EKNAHVLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-17	ARR-B family protein