PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40702.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family FAR1
Protein Properties Length: 203aa    MW: 23834.6 Da    PI: 5.212
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.63.6e-2291181190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 +fY+ Y+k +GFs+rk++++k+ r+g    r + Cs+eg+r++++++  +++++ r  trtgC a+++v+++k ++kw+v+ ++ +HnH+la
  PON40702.1  91 NFYKLYSKFMGFSIRKQQKRKN-RHGVLNIRSWLCSNEGFRKQQDSNaPTRKKEIRGITRTGCLARFRVNLSKyTSKWVVKAFHPNHNHSLA 181
                 6****************99998.78889999***********999995677778899****************9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MSNTKKNLSD FDIREDENAF NSEDDDEACE INSNHEEDEY GCYEAREEWV DADTVFWSNI  60
MDDFGLCKDA EELMETDLVG KEFETMGDAE NFYKLYSKFM GFSIRKQQKR KNRHGVLNIR  120
SWLCSNEGFR KQQDSNAPTR KKEIRGITRT GCLARFRVNL SKYTSKWVVK AFHPNHNHSL  180
ANDIEKLFCD LYAIYLKVFV GKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-14FAR1 family protein