PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40867.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 123aa    MW: 14099 Da    PI: 9.0702
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-09551347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+   +l+ +a + + ++   +W+  ar +g g+t +++k ++ ++
       PON40867.1  5 SWTAKQNKLFENALAIYDKDspdRWHNMARAVG-GKTVEEVKKHYENL 51
                     7********************************.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MASSSWTAKQ NKLFENALAI YDKDSPDRWH NMARAVGGKT VEEVKKHYEN LVEDVNKIET  60
GQIPLPNYRK INNKAYNPYM DEEQSCHGGG FGTVQGGKSR IKLCFLDENV GKKEVMMIKR  120
FER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.14e-35MYB_related family protein