PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40879.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ZF-HD
Protein Properties Length: 347aa    MW: 38542.9 Da    PI: 8.5833
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer993.6e-31114169460
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  vrY+eClkNhAa  Gg+++DGCgEfmps geeg+ +alkCaAC+CHRnFHR+e + e
   PON40879.1 114 VRYRECLKNHAALSGGNVYDGCGEFMPS-GEEGSLEALKCAACQCHRNFHRKEIDGE 169
                  89*************************9.999********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MEFSAQENEM RTLPGSLSYT HLSKEGGERR SRSVLNASHN NNDQNHNHHN GSANINCTTA  60
TQTLDPPRPN FQHNQTLHGS RDPDPDRVTT KITLSPGGAS AKSSSKTTQS SAIVRYRECL  120
KNHAALSGGN VYDGCGEFMP SGEEGSLEAL KCAACQCHRN FHRKEIDGES QLLYSPSSRR  180
ASSTTTNTTA LMLNPLQLPP PLPSPSSLHH HHNHHHPHHK YFNHPPPIIQ PMNVAFGGCG  240
GGGNESSSED LNVYGSTEAV PAVPFALSKK RFRTKFTQEQ KDKMLEFAEK VGWRFQKQDE  300
EEVARFCAEV GVKRQVLKVW MHNNKSTMKL KQQQENVNMV VNNSNMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.18e-34ZF-HD family protein