PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40883.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 93aa    MW: 10507.6 Da    PI: 8.459
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.7e-091558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +++ +a + + ++   +W  +a+ +g g+t++++k ++
       PON40883.1 15 SWTPKQNKQFEKALAVYDKDtpdRWQNVAKAVG-GKTPEEVKRHY 58
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MASGSRSYAR NSNSSWTPKQ NKQFEKALAV YDKDTPDRWQ NVAKAVGGKT PEEVKRHYDI  60
LVQDLMKIES DQFPTPDYRG AGCNHGGFGD EQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.14e-37MYB_related family protein