PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41154.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 116aa    MW: 12493.9 Da    PI: 4.6647
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-1685116132
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 
                 Cs+C +  Tp+WR gp g+ktLCnaCG++y++
  PON41154.1  85 CSHCLSQRTPQWRAGPLGPKTLCNACGVRYKS 116
                 ******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MDFCWNVSIS PPSSDLNGSS SGLDDLFSSQ NTEEDLSLEW LSVFVEDCLT SSGNCLPAPT  60
TTTTTTAAAA NIVHWELPGP VTRRCSHCLS QRTPQWRAGP LGPKTLCNAC GVRYKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.13e-17GATA family protein