PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41224.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family TCP
Protein Properties Length: 354aa    MW: 38206 Da    PI: 7.1699
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP112.84.7e-3571144274
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.e 74 
                 a+k+ +++++h kv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++  
  PON41224.1  71 ATKRASTKDRHRKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsV 144
                 899*************************************************************7777733311 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MAMIQRNEAE EEKERRGVDL RINAGEEEEE ERNDEESNGT TSLNEAVVEL KEEPAEPLQI  60
VPVAAQVPAP ATKRASTKDR HRKVEGRGRR IRMPAACAAR IFQLTRELGH KSDGETIRWL  120
LEHAEPAIIA ATGTGTVPAI AMSVNGTLRI PTAAPDPEPD DPAQSRKRKR RVNSEYVDVN  180
DSVSVSVSAG LAPLTQTQVQ VQQLQQQPVP HQGLVPMWAI PSNAVVPGAF FVFPPMATTA  240
TASTATTQPH IFTIPASATP FINISAARPI SSFVSSMANL VTTPVQLHPT TTTTTTNLNS  300
TNSVSKPPSS MAAPTGNSGT GAGTKRATTQ MLRDFSLEIY DKKELQFMTR SSKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171RKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-54TCP family protein