PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41350.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 262aa    MW: 28760.5 Da    PI: 8.7548
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-1174120354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  +++Lr l+P +      K++Ka+ L +++  +k+L
  PON41350.1  74 KNHSEAERRRRERINAHLATLRGLVPCD-----AKMDKATLLAEVISQMKEL 120
                 58*************************7.....6**********99988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MASYSFSNSS YGSDYSSLFD PFPHGSGGFS GVLRGGSVVP HSLVLDSKRG ELVKAPARVG  60
KKGVSETKAL AALKNHSEAE RRRRERINAH LATLRGLVPC DAKMDKATLL AEVISQMKEL  120
KKNAAEASQG LLIPEDNDEV QIEPYYDNGA GNGNFLYKAY ICCGYRPEIL TDVRQALDTL  180
PLKMVRTEIS TLGDRLKISF VFTCFNENNN DAETCRTLAS SVRETLRSVL DKASALAEYS  240
PRTTPPCKRR RISYFDSSSS SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085ERRRRE
2248252KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-30bHLH family protein