PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON41353.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 157aa MW: 17849.2 Da PI: 7.7534

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON41353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128	4.3e-40	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++C+++pyfp+++p++fa+vh++FGasnv k+l++lp+++r +a++s+ +eA++r++ PvyG+vg+i++l+q++++++++la++++ PON41353.1 5 RCAACKYLRRSCPSNCIFSPYFPSNDPQRFACVHRIFGASNVGKMLQRLPPDRRAEAADSMHFEAKCRIEFPVYGCVGIISQLHQEIQNVETQLATTRA 103 6**********************************************************************************************9998 PP DUF260 100 e 100 e PON41353.1 104 E 104 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MISGRCAACK YLRRSCPSNC IFSPYFPSND PQRFACVHRI FGASNVGKML QRLPPDRRAE 60 AADSMHFEAK CRIEFPVYGC VGIISQLHQE IQNVETQLAT TRAEIAFITS SNNTIQEAQL 120 RDDQYYSSLN NNFMQPQHTN IIGQSDQMAF NNSSWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	7e-52	LBD family protein