PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41413.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 590aa    MW: 64089.6 Da    PI: 4.8427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.51.7e-1362215841374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++l+la+al++++  la++++ +m+++a+yf+eALa+r+++    +y    ps+  +++ ++ l  +  f+e++P+lkf+h+taN
  PON41413.1 221 LVHTLMACAEAVQQDKLKLADALVKHIGILAASQAGAMRKVATYFAEALARRIYG----IY----PSDCLDSSYTDML--QMHFYETCPYLKFAHFTAN 309
                 689****************************************************....44....3433333344444..446**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l+dle+ +++++p
  PON41413.1 310 QAILEAFATSNRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLEPAMFDLRP 408
                 **************************************************************************************************9 PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgrei 294
                    E++aVn+v++lhrll++++++e+    v+  +  ++Pk+++vveqea+hns+ Fl+rf+e+l+yys+lfdsle + + +  +++ ++++++lg++i
  PON41413.1 409 aeIETVAVNSVFELHRLLARPGAVEK----VMGSIIAMRPKILTVVEQEANHNSQFFLDRFTESLHYYSTLFDSLEGSSSLAPpSQDLVMSEVYLGKQI 503
                 8899**********************....*********************************************7775444469999*********** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +nvvaceg +r+erhetl +Wr+r+++aGF +v+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW+
  PON41413.1 504 CNVVACEGPDRVERHETLDRWRKRFGAAGFDSVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLTLGWHTRPLIATSAWQ 584
                 ********************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    
MKMKRDHPDN FVGAGAPGYG GTNGGASNLK GECSSPVLSN GKAKIWEEEQ EAGGMDELLA  60
VLGYRVRSSD MADVAQKLEQ LEMVLGSAQE DGISQLSDTV HYNPSDLSGW VHSMLSELNI  120
PPPNIDPQID GPFLAPAEQS AIAAVDFSTD DSEYDLRAIP GVAAYPPQKE TQSENNPNKR  180
LKTSIGSSSL SSLSPPAPAT EMAESIRAVV VVDSQEAGVR LVHTLMACAE AVQQDKLKLA  240
DALVKHIGIL AASQAGAMRK VATYFAEALA RRIYGIYPSD CLDSSYTDML QMHFYETCPY  300
LKFAHFTANQ AILEAFATSN RVHVIDFGLK QGMQWPALMQ ALALRPGGPP AFRLTGIGPP  360
QPDNTDALQQ VGWKLAQLAE TIGVEFEFRG FVANSLADLE PAMFDLRPAE IETVAVNSVF  420
ELHRLLARPG AVEKVMGSII AMRPKILTVV EQEANHNSQF FLDRFTESLH YYSTLFDSLE  480
GSSSLAPPSQ DLVMSEVYLG KQICNVVACE GPDRVERHET LDRWRKRFGA AGFDSVHLGS  540
NAFKQASMLL ALFAGGDGYR VEENNGCLTL GWHTRPLIAT SAWQLAANPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein