PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41516.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 236aa    MW: 26238.4 Da    PI: 6.6841
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-17112162255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrdp +ng   r++lg++  ae+Aa a+++a+ k++g
  PON41516.1 112 HYRGVRKRP-WGKYAAEIRDPAKNG--SRVWLGTYERAEDAALAYDRAAFKIRG 162
                 69*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MYGSELASSD LALLDSICHY LLDDTVPLVI SSSSDDGAPI LTSQSSTSFD NGLVFAENYA  60
ELPFKLPKDE SYSEDLLAHT SPKFADSREK ATDDHSDAAV AREMQAPRSV MHYRGVRKRP  120
WGKYAAEIRD PAKNGSRVWL GTYERAEDAA LAYDRAAFKI RGSKAKLNFP HLIGSDCVNY  180
EPVRVKPKRR RLSQELNNGN GSPVLSSKRN RTVMEVDSVV FNSVSWVEES GVIKYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188192KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-33ERF family protein