PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41722.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family WRKY
Protein Properties Length: 380aa    MW: 41478.4 Da    PI: 6.1268
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.43.4e-34208265259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
  PON41722.1 208 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCSVKKRVERSFQDPSVVITTYEGQHNHP 265
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MSDIEPKDLY YHGNFFQQVF SSGGLSSSSS SSFLTTQNPN TSINQKLNMS PPSLQEFDSI  60
GTSSYMSGFT TDDCLVQDPM EYYNSFMTTG FGLSSSSSEV VLSSINGGST NYHQSPVTMM  120
TTSSPQHDHS SISSSSTEAA GGGGGGDHQE DSSSGKKDQQ PNGSEDKYQE DENSSKKVSK  180
VKNNKKGEKK QKEPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCSV  240
KKRVERSFQD PSVVITTYEG QHNHPLPSAL RGNAAAAAAM FPPSMLAPTS SSSSLMVGSG  300
AGGFGQEFLF QMPNNYMIGY NQLDAGSSST AGSILSHVYQ QSNINNSRMD DHDHQMQAAG  360
DDYGLLQDMV PGSMFFKQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-52WRKY family protein