PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42051.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 249aa    MW: 28401.3 Da    PI: 7.4839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding262.1e-08126168346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT eE ++l d++kq+  + +  Ia +++  Rt +++k+r+++
       PON42051.1 126 TWTREETDQLFDLCKQFDLR-FIVIADRFPSSRTVEELKDRYYN 168
                      7*******************.*********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDAKDILGLP KNALPVTQEK KSRPQKDSQR KPDGISREVY ALTGGVPPLM PSIDSKKRPP  60
ADEKITWQWL PFTSSARKDN LQLYHWVRVV NGVPPTGDYS FAKYNKSVDI VQYTDEEYDK  120
HLADPTWTRE ETDQLFDLCK QFDLRFIVIA DRFPSSRTVE ELKDRYYNGM SSFPLLDSYL  180
SSILRVYLRT YALDQMIQAA RLLAAMPPSA RENSLASAVN LLEGKYEGAA DVLMTTFSNR  240
TSVFLAYII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.11e-102MYB_related family protein