PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42774.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 235aa    MW: 26888.2 Da    PI: 7.5447
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.3e-09141188455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i+++++ L++l+P +    +k +  +++L + + Y++sLq
  PON42774.1 141 SHSLAERVRREKIKTKLSCLQDLVPGC----QKTMGLVMMLDEIISYVRSLQ 188
                 8*************************9....455999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDQNITMNQF GELNSTMLES FNITDSLVEN VPGYNFPENP LDLSYNFPDP SHSVHPNEFQ  60
ARTIDLTRDI SQVSKEMEAS ETGSEDVCSI ASAKRSKDYN KKTTKKNSLG KESKRSNIER  120
KQVKPEEVIH VRAKRGKATD SHSLAERVRR EKIKTKLSCL QDLVPGCQKT MGLVMMLDEI  180
ISYVRSLQNQ VEFLSRELEA ACSYQLSRNR RALKHEQATG SHDSQEVEKW AREQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.15e-40bHLH family protein