PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42790.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 231aa    MW: 24790.2 Da    PI: 7.0482
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000326991123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C + F ++  L  H++ H
  PON42790.1 69 YECQYCFREFANSQALGGHQNAH 91
                99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MTATGASAAV PPLKLFGFSI SDDNDNVDHQ LDQTSKSTPG STTQNNDDRS DDSVTTLKPT  60
NDVVGHHKYE CQYCFREFAN SQALGGHQNA HKKERQLMKR AQTQATSSNT ATTARNYALA  120
NISHVSGFMS PHLLDLAAAQ PSSWYYMAPQ YAPALHMSSH GGGSHHLSRT NSMPGRRVYH  180
GEATALGALS DGVLYDNSQV FLGETSTNNV TRHPDKGLGL DLHLGLGPAG P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.11e-14C2H2 family protein