PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42924.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 202aa MW: 23482.5 Da PI: 8.6538

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	67.2	1.6e-21	9	42	1	34
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae PON42924.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE 42 79******************************98 PP
2	K-box	92.9	5.5e-31	41	127	14	100
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 aes+++e+ kLk++ e+Lqr+qR+llGedL++L+ keL+q+e+qLe+slk++Rs+K++++l+q+ +lq +e++l e+n+aL+ kl+e PON42924.1 41 AESSYREYLKLKNRFESLQRTQRNLLGEDLGPLNTKELEQIERQLESSLKQVRSTKTQYMLDQLTDLQGREHMLIEANRALTIKLDE 127 58999****************************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AESSYREYLK LKNRFESLQR 60 TQRNLLGEDL GPLNTKELEQ IERQLESSLK QVRSTKTQYM LDQLTDLQGR EHMLIEANRA 120 LTIKLDEISS RNNYRQSWEV NDHDQQQTIS YGQQHGESQG LIFQPLDCNP TLQIGYNVAV 180 SEQMNTPSHG QQVNGFIPGW ML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	4e-88	MIKC_MADS family protein