PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43077.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 332aa MW: 37355.5 Da PI: 4.9014

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.6e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++k g+ +W++ ++ g+ R++k+c++rw +yl PON43077.1 14 KGPWTAEEDEILVNYIKNNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79*************998888******99**********97 PP
2	Myb_DNA-binding	52	1.7e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+++++ +lG++ W++Ia+ ++ gRt++++k+ w+++l PON43077.1 68 RGPFTQEEEKLIIQLHGMLGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGRTPCCDRK GLKKGPWTAE EDEILVNYIK NNNGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTQEEEKLII QLHGMLGNRW AAIASQLPGR TDNEIKNLWN THLKKRLLCM 120 GLDPRTHEPF ASQPHNPSTN SSPASPATRH MAQWESARLE AEARLSKESS LFTTSQHITK 180 CNDSSDYFLR LWNSEVGDSF RKLTTKDDKT ACCSPVSQAS ASALTTEAGL NREGFDTMAG 240 DQAEDVDCKS FIKFSNTEEE EEEEEEEDHV RMGAGSDSSC SNDMEDSSDS SALQLLLDFP 300 INNDMSFLEE NCVDHYTTDP AMLSENSFIF RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-115	MYB family protein