PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43215.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 1031aa MW: 114002 Da PI: 6.4468

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.7	1.3e-41	171	248	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls ak+yhrrhkvCe+hska ++lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ PON43215.1 171 ICQVEDCGADLSAAKDYHRRHKVCEMHSKAGMALVGNVMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNKRRRKTNP 248 5**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MEARFGGEAH AHHHHHHHHH HPPHHPHPHF YGVTSADLST VGKRTTEWDL NQWTWDPDLL 60 VATSVNPVVV PSDTMAMGRQ FFPIGSTAIP ETGGSSNTSS SCSEEGNPVI DKGKRELEKR 120 RRANGVDDQN LNDEAATLTL KLGGSDREMA NWEGTSGKKT KLVGNTSNRA ICQVEDCGAD 180 LSAAKDYHRR HKVCEMHSKA GMALVGNVMQ RFCQQCSRFH ALQEFDEGKR SCRRRLAGHN 240 KRRRKTNPET VVNGTSLTED QTSGYLLISL LRILSNMHSN KSDQTTDQDL LSHLLKSLAS 300 QTSDHGGKSV AALLQEPQKL LNDGMSVGNS EAVSTFPSNG SQGPPRPIKQ NHAISVSEMP 360 QQGVHLHNAN GGSIQATSSV KPSVLNSPPS YSEARDSTAG QNKMNNFDLN DIYIDSDDGT 420 EDPERSSPPT NLVTSSLDCP SWVQQDSHQS SPPQTSGNSD SASAQSPSSS NGEAQSRTDR 480 IVFKLFGKEP NDCPLVLRAQ ILDWLSHSPS DIESYIRPGC IILTIYLRQS ESAWEELCDD 540 MSSSLSRLLD VSDGSFWRSG WTFIRVQHQI AFVYNGQVIV DTSLPLRSNS YSKIVSVKPI 600 AVPASERAEF LVRGINLVRP STRLFCALEG KYLVQEAIHE MMDGVDNLEH DEQCINFSCS 660 IPVTNGRGFV EIEDQGLGSS FFPFIVAEED VCSEIRVLES VLECTESNAV VGGIGKIETY 720 NQAVDFVHEM GWLLHRSQLR SRLGDLDPNA DLFPLKRFKW LMEFSVDHDW CAVVRKLLDI 780 LIDGSISTGE DRSLSLTLSE MGLLHRAVRR NSRPLVEVLL KYVPKNLSDQ LESEDKAVTD 840 GVNHKLFFRP DVMGPAGLTP LHIAAGKDGS EDVLDALTND PGMVGIEAWR SAHDSTGSTP 900 EDYARLRGHY SYIRLIQRKI NKRPPASEHV VVNIPGDFND CSANQKKNAL ATTFEIGRRE 960 SLRRVQHPCG LCDRKLAYGT ISRSIVYRPA MLSMVAIAAV CVCVALLFKS CPEVVYVFQP 1020 FRWELLEFGT S

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MEARFGGEAH AHHHHHHHHH HPPHHPHPHF YGVTSADLST VGKRTTEWDL NQWTWDPDLL  60
VATSVNPVVV PSDTMAMGRQ FFPIGSTAIP ETGGSSNTSS SCSEEGNPVI DKGKRELEKR  120
RRANGVDDQN LNDEAATLTL KLGGSDREMA NWEGTSGKKT KLVGNTSNRA ICQVEDCGAD  180
LSAAKDYHRR HKVCEMHSKA GMALVGNVMQ RFCQQCSRFH ALQEFDEGKR SCRRRLAGHN  240
KRRRKTNPET VVNGTSLTED QTSGYLLISL LRILSNMHSN KSDQTTDQDL LSHLLKSLAS  300
QTSDHGGKSV AALLQEPQKL LNDGMSVGNS EAVSTFPSNG SQGPPRPIKQ NHAISVSEMP  360
QQGVHLHNAN GGSIQATSSV KPSVLNSPPS YSEARDSTAG QNKMNNFDLN DIYIDSDDGT  420
EDPERSSPPT NLVTSSLDCP SWVQQDSHQS SPPQTSGNSD SASAQSPSSS NGEAQSRTDR  480
IVFKLFGKEP NDCPLVLRAQ ILDWLSHSPS DIESYIRPGC IILTIYLRQS ESAWEELCDD  540
MSSSLSRLLD VSDGSFWRSG WTFIRVQHQI AFVYNGQVIV DTSLPLRSNS YSKIVSVKPI  600
AVPASERAEF LVRGINLVRP STRLFCALEG KYLVQEAIHE MMDGVDNLEH DEQCINFSCS  660
IPVTNGRGFV EIEDQGLGSS FFPFIVAEED VCSEIRVLES VLECTESNAV VGGIGKIETY  720
NQAVDFVHEM GWLLHRSQLR SRLGDLDPNA DLFPLKRFKW LMEFSVDHDW CAVVRKLLDI  780
LIDGSISTGE DRSLSLTLSE MGLLHRAVRR NSRPLVEVLL KYVPKNLSDQ LESEDKAVTD  840
GVNHKLFFRP DVMGPAGLTP LHIAAGKDGS EDVLDALTND PGMVGIEAWR SAHDSTGSTP  900
EDYARLRGHY SYIRLIQRKI NKRPPASEHV VVNIPGDFND CSANQKKNAL ATTFEIGRRE  960
SLRRVQHPCG LCDRKLAYGT ISRSIVYRPA MLSMVAIAAV CVCVALLFKS CPEVVYVFQP  1020
FRWELLEFGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein