PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43248.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 295aa    MW: 33533.7 Da    PI: 9.0797
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-172067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
       PON43248.1 20 RGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLERCGKSCRLRWINYL 67
                     788*******************************************97 PP
2Myb_DNA-binding48.81.6e-1573117147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg +++eE+  ++++++ lG++ W+ Ia+ ++ gRt++++k++w++ 
       PON43248.1  73 RGTFSAEEENHIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNFWNSC 117
                      899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGRQRQRQTQ PCCYKQKLRR GLWSPEEDEK LLRHITKYGH GCWSSVPKQA GLERCGKSCR  60
LRWINYLRPD LKRGTFSAEE ENHIIELHAV LGNRWSQIAA QLPGRTDNEI KNFWNSCLKK  120
KLRQRGIDPL INQLIIPAQP KPSSSLSPYH NYSMTTTSTN AVVHQNKNSS CSSSPALNYA  180
SRSHESAIIN SNYNNVVVPC TESAAAASNS SIVIPPTRVA WQMDDNDPQL SSACAADYRE  240
IQYQHVNVNV NHNHNHVMME TQPPDDLIKW AEYLSNPTTF LTFPAFQNHA KTHIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.35e-82MYB family protein