PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43288.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 548aa    MW: 61175.3 Da    PI: 5.4608
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS433.81.3e-1321775482374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL +cA+a++++d+  +++l+++l++++s +gdp+qRl ay++e+L a+la+s+s++ykal+++e +   s+e +++++l++e++P++kf+++ aN 
  PON43288.1 177 KGLLCACAKALAENDMLITEWLISELRQMVSVSGDPLQRLGAYMLEGLVAKLASSGSSIYKALRCKEPA---SAEFFSYMHLLYEICPYFKFGYMSANG 272
                 568*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI eav+ e++vHiiDf+i qG+QW+ L++aLa+Rp+gpp++RiTg+++++s   +   le +g rL+++Ae+++vpfef++ +  + +++ele+L ++
  PON43288.1 273 AIAEAVKDESTVHIIDFQIVQGAQWMILIHALATRPGGPPKIRITGIDDSTSAyaRGGGLEVVGLRLSRVAESCNVPFEFHP-INASGSEVELEDLGLR 370
                 *************************************************998899999************************.6999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesv..sleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 pgEa+aVn++++lh+++desv  +++++rd++L+l kslsPkvv++veqe+++n+++F  rf+e+++yy+a+f+s++ +l+re++eri+vE+++l+r+i
  PON43288.1 371 PGEAIAVNFAMMLHHMPDESVggHTPNHRDRLLRLAKSLSPKVVTLVEQETNTNTAPFYPRFVETFNYYMAVFESIDLTLAREHKERINVEQHCLARDI 469
                 *******************97225666************************************************************************ PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vnv+ac g er+erhe l+kWr+r+++aGF+p+pls  +++++k+llr+++++ y++ee++g l+lgW+++++v+ +aWr
  PON43288.1 470 VNVIACDGPERVERHELLGKWRSRFTMAGFRPYPLSPLVNSTIKALLRNYSEK-YTLEERDGVLYLGWMEKAMVASCAWR 548
                 ***************************************************65.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MKESKSYTIS NGSHRLSEQQ VEEPESYCWP PIQNLDHLTG TAKGSQDTHL SIKTFERYCT  60
LESSSGTSSN PVQNSSSSVS FSPDGSPSSQ PETQSYHIDQ HHSPDNVCAS PVSHSCLTDD  120
VDGLMHKIRE LESAMLGTDS DIPEMYNMSN KVRQNEVSLE EENISQIMDM ISRRDLKGLL  180
CACAKALAEN DMLITEWLIS ELRQMVSVSG DPLQRLGAYM LEGLVAKLAS SGSSIYKALR  240
CKEPASAEFF SYMHLLYEIC PYFKFGYMSA NGAIAEAVKD ESTVHIIDFQ IVQGAQWMIL  300
IHALATRPGG PPKIRITGID DSTSAYARGG GLEVVGLRLS RVAESCNVPF EFHPINASGS  360
EVELEDLGLR PGEAIAVNFA MMLHHMPDES VGGHTPNHRD RLLRLAKSLS PKVVTLVEQE  420
TNTNTAPFYP RFVETFNYYM AVFESIDLTL AREHKERINV EQHCLARDIV NVIACDGPER  480
VERHELLGKW RSRFTMAGFR PYPLSPLVNS TIKALLRNYS EKYTLEERDG VLYLGWMEKA  540
MVASCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein