PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43291.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 575aa MW: 62300.9 Da PI: 6.7203

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.7e-31	223	280	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k PON43291.1 223 DDGYNWRKYGQKHVKGSEFPRSYYKCTYPNCEVKKLFERSY-DGQITEIIYKGTHDHPK 280 8**************************************.*************85 PP
2	WRKY	106.2	1.6e-33	395	453	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PON43291.1 395 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 453 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEAATAADLH IRSSDDVDPG RAEFPDPPSG CGGAKYKLLS PAKLPISRSA CLTIPPGLSP 60 SSFLESPVLL SNMKAEPSPT TGTFMKPLVA QGSVGSATYS TTTLCSNINI SDNKNSSSFE 120 FKPHATSNMV TTDPKYQRTA QSVQVQGQPQ SFTPVSLVKT EMAVNSNELS LSAAHGVVAS 180 GTSASASADG DSDELNQNGN PNSGVQTAQF DLKGSGPSVI TSDDGYNWRK YGQKHVKGSE 240 FPRSYYKCTY PNCEVKKLFE RSYDGQITEI IYKGTHDHPK PQPSRRYNTG TMMSTQEERS 300 DKFSPITGRD DKSSSMYGQA SNTNEANGTP DLSPISANDD TVEATGNRIH DDVDDDDPFS 360 KRRKMEIGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK 420 CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARNS SHEMVGSMAA SVPVRIRSEE 480 TDTISLDLGV GISSAAESRS NEHLPTSHSR LVESQTHNSN VNVVPVPSFY GILGNGLNQF 540 GSRENLGEGR SIEISSLNHS TYPYPQNMGR ILTGP

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEAATAADLH IRSSDDVDPG RAEFPDPPSG CGGAKYKLLS PAKLPISRSA CLTIPPGLSP  60
SSFLESPVLL SNMKAEPSPT TGTFMKPLVA QGSVGSATYS TTTLCSNINI SDNKNSSSFE  120
FKPHATSNMV TTDPKYQRTA QSVQVQGQPQ SFTPVSLVKT EMAVNSNELS LSAAHGVVAS  180
GTSASASADG DSDELNQNGN PNSGVQTAQF DLKGSGPSVI TSDDGYNWRK YGQKHVKGSE  240
FPRSYYKCTY PNCEVKKLFE RSYDGQITEI IYKGTHDHPK PQPSRRYNTG TMMSTQEERS  300
DKFSPITGRD DKSSSMYGQA SNTNEANGTP DLSPISANDD TVEATGNRIH DDVDDDDPFS  360
KRRKMEIGGI DVTPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK  420
CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPTARNS SHEMVGSMAA SVPVRIRSEE  480
TDTISLDLGV GISSAAESRS NEHLPTSHSR LVESQTHNSN VNVVPVPSFY GILGNGLNQF  540
GSRENLGEGR SIEISSLNHS TYPYPQNMGR ILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein